Post-quantum cryptography migration just got its first enforceable federal deadline. EO 14409 requires U.S. agencies to ...

Ultra Wide Band (UWB) technology has a wide range of applications in indoor positioning due to its high precision and strong anti-interference ability. However, in complex indoor environments, UWB ...

pggb builds pangenome variation graphs from a set of input sequences. A pangenome variation graph is a kind of generic multiple sequence alignment. It lets us understand any kind of sequence variation ...

This important study addresses the problem of detecting weak similarity between protein sequences, a procedure commonly used to infer homology or assign putative functions to uncharacterized proteins.

Edit distance—a classical problem in computer science—has received ongoing attention from both practitioners and theoreticians. Given two strings A and B, the edit distance is the minimum number of ...

In 2022, a team of computer scientists presented a groundbreaking algorithm for the maximum flow problem: How does one transport the most supplies from a source node to a sink node in a network while ...

Proteinortho is a widely used tool to predict (co)-orthologous groups of genes for any set of species. It finds application in comparative and functional genomics, phylogenomics, and evolutionary ...

NeighborNet constructs phylogenetic networks to visualize distance data. It is a popular method used in a wide range of applications. While several studies have investigated its mathematical features, ...

Department of Chemical and Biomolecular Engineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61081, United States Department of Bioengineering, University of Illinois ...

Circular consensus sequencing with Pacific Biosciences (PacBio) technology generates long (10–25 kilobases), accurate ‘HiFi’ reads by combining serial observations of a DNA molecule into a consensus ...